Supplementary Data

Files in this Data Supplement:

• Appendix 1 - Summary of data gathered in a survey of phylogenetic trees for Fungi published in 1990-2003 (including six works in press as of January, 2004, which were considered in the analyses described below, and one paper added as an update to this appendix following the completion of analyses).
• Appendix 2 - Taxa included in this study, with voucher specimen, culture, DNA, and sequence source information. GenBank identification numbers are provided for sequences obtained from GenBank, and accession numbers are provided for sequences generated as part of this study and Reeb et al. (2004).
• Appendix 3 - Taxa excluded from phylogenetic analyses due to incongruence (NJBP ≥ 70%) among data partitions or unalignable mitSSU sequences (*). Voucher specimen, culture, DNA, and sequence source information. GenBank identification numbers are provided for sequences obtained from GenBank, and accession numbers are provided for sequences generated as part of this study.
• Appendix 4 - Two-locus (nucSSU + nucLSU) Bayesian MCMCMC fungal tree of life depicting phylogenetic relationships among 558 taxa in 430 genera, 68 orders and five phyla.
• Appendix 5 - Phylogenetic relationships among 157 ascomycete and basidiomycete taxa based on combined evidence from nucSSU, nucLSU, and RPB2.
• Appendix 6 - Phylogenetic relationships among 103 ascomycete and basidiomycete species based on combined evidence from nucSSU, nucLSU, mitSSU rDNA, and RPB2.